-
Role of CD64+CX3CR1+ mononuclear phagocytes during Helicobacter pylori infection
-
Kronsteiner-Dobramysl, B., M. Viladomiu, J. Bassaganya-Riera, C. Phillipson, and R. Hontecillas, (2015) European Congress of [...]
-
The immune modulatory mechanisms of lanthionine synthetase C-like 2
-
Philipson, C., C. Hetzel, K. Eden, R. Hontecillas and J. Bassaganya-Riera (2015) The immune modulatory mechanisms of lanthionine [...]
-
Modeling mucosal immunity and gut microbiota interactions during Clostridium difficile infection
-
Viladomiu, M., A. Leber, R. Hontecillas. V. Abedi, S. Hoops, and J. Bassaganya-Riera (2015) Modeling mucosal immunity and gut [...]
-
Lanthionine synthetase C-like 2: A novel therapeutic target for inflammatory bowel disease
-
Carbo, A., R. Hontecillas, J. Cooper, R. Gandour, M. Ehrich, and J. Bassaganya-Riera. (2015) Lanthionine synthetase C-like 2: A novel [...]
-
Loss of NLRX1 results in increased intestinal pathology and T cell responses in mice with inflammatory bowel disease
-
Eden, K., R. Hontecillas, M. Viladomiu, C. Philipson, P. Michalak, A. Leber, N. Philipson, and J. Bassaganya-Riera (2015) Loss of NLRX1 [...]
-
NLRX1 attenuates tumorigenesis through the negative regulation of AKT and NF-kB signaling
-
Allen, I.C., A. Simmons, V. Capria, T. LeRoith, G. Robbins, B. Held, C.W. Philipson, N. Dervisis, V. Yuzbasiyan-Gurkan, R. [...]
-
Novel Orally Active Ligands of Lanthionine Synthetase C-like protein 2 Ameliorate Influenza-related Inflammation and Immunopathology
-
Philipson C.W., P. Lu, J. Bassaganya-Riera, S. Vento, A. Carbo, M. Viladomiu, S. Kale, X. Zhang, A. Uren, A. Kallarakal, B. Xu, and R. [...]
-
Mucosal antimicrobial protection toward Enteroaggregative Escherichia coli infection is modulated by dietary tryptophan through an IL17-dependent mechanism
-
Philipson C.W., J. Bassaganya-Riera, M. Viladomiu, A. Carbo, K. Eden, and R. Hontecillas (2014) Mucosal antimicrobial protection [...]
-
Regulation of Helicobacter Pylori Replication by Macrophage PPAR γ
-
Kronsteiner-Dobramysl B, J. Bassaganya-Riera, M. Viladomiu, C. Philipson, E. Schiff and R. Hontecillas (2014) Regulation of [...]
-
Immune modulatory mechanisms of Oncostenum bojerianum extracts during Clostridium difficile infection in mice
-
Viladomiu M., R. Hontecillas, D. GI. Kingston, A. Eaton, X. Zhang, C. W. Philipson, E. Schiff, K. Eden, P. Lu, A. Carbo and J. [...]
-
Using Big Data to Inform Mental Health Policies
-
Andalib, M., G. Hughes, N. Hosseinichimeh, A.B. Lakeh, V. Abedi, R. Zand, N. Ghaffarzadegan. INFORMS 2015. Philadelphia, PA. November 1-4, 2015
-
ENISI Multiscale modeling of mucosal immune responses driven by high performance computing
-
Vida Abedi, Raquel Hontecillas, Stefan Hoops, Nathan Liles, Adria Carbo, Pinyi Lu, Cassandra Philipson and Josep Bassaganya-Riera. IEEE International Conference on Bioinformatics and Biomedicine (BIBM 2015). Washington, DC, USA. 2015
-
Modeling Immunity to Enteric Pathogens
-
Bassaganya-Riera, J. (2015) Invited Speaker; Modeling Immunity to Enteric Pathogens, Modeling Immunity for Biodefense Summer School/Symposia, Rochester, NY
-
Modeling Immune responses to Helicobacter pylori
-
Bassaganya-Riera, J. (2015) Invited Speaker; Modeling Immune responses to Helicobacter pylori, Modeling Immunity for Biodefense, Rockville, MD
-
Computational modeling of mechanisms underlying immune responses to Helicobacter pylori
-
Bassaganya-Riera, J. (2015) Invited Speaker; Computational modeling of mechanisms underlying immune responses to Helicobacter pylori, AMS Esteren Sectional, Georgetown University, Washington, DC
-
Computational immunology in autoimmune diseases
-
Bassaganya-Riera, J. (2014) Invited Speaker; Computational immunology in autoimmune diseases, Feinstein Institute for Medical Research, Manhasset, NY
-
ENISI MSM: A novel multiscale modeling platform
-
Bassaganya-Riera, J. (2014) Invited Speaker; ENISI MSM: A novel multiscale modeling platform, IEEE International Conference: BIBM, Belfast, UK
-
Multiscale Modeling and Computational Immunology in Infectious Diseases
-
Bassaganya-Riera, J. (2014) Invited Speaker; Multiscale Modeling and Computational Immunology in Infectious Diseases, DoD, Dahlgren, VA
-
Mechanisms underlying immune responses to enteric pathogens
-
Bassaganya-Riera, J. (2013) Invited speaker; Mechanisms underlying immune responses to enteric pathogens, Division of Gastroenterology, VT Carilion School of Medicine, Roanoke, VA.
-
From the past to the future
-
Bassaganya-Riera, J. (2013) Session Chair; International Conference on Computational Biology: From the past to the future, Virginia Tech, Blacksburg, VA.
-
Phase III Placebo-Controlled, Randomized Clinical Trial with Synthetic Crohn's disease Patients to Evaluate Treatment Response
- Abedi, V., P. Lu, R. Hontecillas, M. Verma, G. Vess, C. Philipson, A. Carbo, A. Leber, N.T. Juni, S. Hoops, J. Bassaganya-Riera. Emerging Trends in Computational Biology, Bioinformatics, and Systems Biology – Systems & Applications. In Press: Elsevier/MK 2015.
-
Modeling exercises
- Abedi, V., S. Hoops, R. Hontecillas, A. Carbo, C. Philipson, M. Viladomiu, A. Leber, P. Lu, J. Bassaganya-Riera. Computational Immunology: Models and Tools. Elsevier 2015.
-
Multiscale Modeling: Concepts, Technologies, and Use Cases in Immunology
- Abedi, V., R. Hontecillas, A. Carbo, C. Philipson, S. Hoops, J. Bassaganya-Riera. Computational Immunology: Models and Tools. Elsevier 2015.
-
From Big Data Analytics and Network Inference to Systems Modeling
- Michalak, P., B.W. Sobral, V. Abedi, Y.B. Kim, X. Deng, C. Philipson, M. Viladomiu, P. Lu, K. Wendelsdorf, R. Hontecillas, J. Bassaganya-Riera. Computational Immunology: Models and Tools. Elsevier 2015.
-
Agent-Based Modeling and High Performance Computing
- Alam, M., V. Abedi, J. Bassaganya-Riera, K. Wendelsdorf, K. Bisset, X. Deng, S. Eubank, R. Hontecillas, S. Hoops, M. Marathe. Computational Immunology: Models and Tools. Elsevier 2015.
-
Ordinary Differential Equations (ODE) based Modeling
- Hoops, S., R. Hontecillas, V. Abedi, A. Leber, C. Philipson, A. Carbo, J. Bassaganya-Riera. Computational Immunology: Models and Tools. Elsevier 2015.
-
Immunoinformatics cybernfrastructure for modeling and analytics
- Hoops, S., B.W. Sobral, P. Michalak, V. Abedi, B. Kronsteiner, R. Hontecillas, M. Viladomiu, J. Bassaganya-Riera. Computational Immunology: Models and Tools. Elsevier 2015.
-
Use of Computational Modeling in Immunological Research
- Hontecillas, R., J. Bassaganya-Riera, C. Philipson, A. Leber, M. Viladomiu, A. Carbo, K. Wendelsdorf, S. Hoops. Computational Immunology: Models and Tools. Elsevier 2015.
-
Computational Modeling
- Bassaganya-Riera, J., R. Hontecillas, V. Abedi, A. Carbo, C. Philipson, S. Hoops. Computational Immunology: Models and Tools. Elsevier 2015.
-
Introduction to Computational Immunology
- Bassaganya-Riera, J., R. Hontecillas. Computational Immunology: Models and Tools. Elsevier 2015.
-
Modulation of CD8+ T cell Responses by Conjugated Linoleic Acid
- Bassaganya-Riera, J, R. Hontecillas. Advances in CLA Research. Champaign, IL: American Oil Chemists Society Press 2006.
-
Computational Immunology: Models, tools and approaches for systems immunology
- Bassaganya-Riera, J.. Elsevier 2015.
-
Literature mining and ontology mapping applied to big data
- Abedi V, M. Yeasin, R. Zand. Mining Big Data to Improve National Security. Elsevier 2015.
-
Supervised Learning with Artificial Neural Network in Modeling of Cell Differentiation Process
- Lu, P, V. Abedi, Y. Mei, R. Hontecillas, C. Philipson, S. Hoops, A. Carbo, J. Bassaganya-Riera,. Emerging Trends in Computational Biology, Bioinformatics, and Systems Biology (1st ed.). Burlington, Massachusetts: Morgan Kaufmann (an imprint of Elsevier) 2015. 1-18
-
Method of Using Punicic Acid to Enhance Immune Response and Prevent Metabolic Disorders.
- Bassaganya-Riera, J.
International Patent Application Serial No. PCT/US2005/001811 U.S. Patent No: 8,258,188
-
Method of Using Punicic Acid to Enhance Immune Response and Prevent Metabolic Disorders.
- Bassaganya-Riera, J.
European Patent Application Serial No. 05711709.5
-
Method of Using Punicic Acid to Enhance Immune Response and Prevent Metabolic Disorders.
- Bassaganya-Riera, J.
Chinese Patent Application Serial No. 2005800088789
-
Method of Using Catalpic Acid to Treat and Prevent Metabolic Disorders.
- Bassaganya-Riera, J.
U.S. Patent No: 7,687,544
-
Method of Using Abscisic Acid to Treat and Prevent Diabetes and Inflammation.
- Bassaganya-Riera, J., A.J. Guri, and R. Hontecillas
U.S. Patent No: 7,741,367.
-
Method of Using Abscisic Acid to Treat and Prevent Diseases and Disorders.
- Bassaganya-Riera, J., A.J. Guri, and R. Hontecillas
U.S. Patent No: 1,986,624.
-
Method of Using Abscisic Acid to Treat and Prevent Diabetes and Inflammation.
- Bassaganya-Riera, J., A.J. Guri, and R. Hontecillas
International Patent Application Serial No. PCT/US2007/003366
-
Method of Using Abscisic Acid to Treat and Prevent Diabetes and Inflammation.
- Bassaganya-Riera, J., A.J. Guri, and R. Hontecillas
European Patent Application Serial No. 07763254.5
-
Method of Using Catalpic Acid to Treat and Prevent Hyperinsulinemia.
- Bassaganya-Riera, J.
U.S. Patent No: 7,834,058
-
Method of Using Catalpic Acid to Dyslipidemia.
- Bassaganya-Riera, J.
U.S. Patent No: 8,084,500
-
Method of using Conjugated Linoleic Acid to Enhance Thymocyte Development.
- M. O’Shea and Bassaganya-Riera, J.
European Patent Application Serial No. 06250952.6
-
Method of using probiotic bacteria to prevent obesity and type 2 diabetes.
- Bassaganya-Riera, J., R. Hontecillas, MG Dominguez-Bello, B. Sobral
U.S. Provisional Patent Application No: 60/942,016.
-
Method of Using Nutraceuticals for Ameliorating Hypertension and Vascular Inflammation.
- Bassaganya-Riera, J., A.J. Guri, and R. Hontecillas
(08.094 VTIP Disclosure); U.S. Provisional Patent Application No: 61/095662. U.S. Patent Application No. 12/869,237.
-
Method of synergistically enhancing the therapeutic efficacy and safety of medications through a combination therapy.
- Bassaganya-Riera, J., A.J. Guri, and R. Hontecillas
(09-070 VTIP Disclosure); U.S. Provisional Patent Application No: 61/147773. U.S. Patent Application No. 12/695,915; 13/905,888 & EU10736394.7
-
Method of synergistically enhancing the therapeutic efficacy and safety of medications through a combination therapy.
- Bassaganya-Riera, J., A.J. Guri, and R. Hontecillas
International Patent Application Serial No. PCT/US2010/022390.
-
Method of using ABA for preventing and treating gut inflammatory disorders.
- Bassaganya-Riera, J., A.J. Guri, and R. Hontecillas
(10-066 VTIP Disclosure). CIP Application No: 12/712,899; Issued 8,367,727
-
Method of using lanthionine synthetase component C-like proteins as molecular targets for preventing and treating diseases and disorders.
- Bassaganya-Riera, J., P. Lu, and R. Hontecillas
(10-116 VTIP) Provisional Patent Application No: 61/331,086; U.S. Patent Application No. 13/100,795
-
Method of using lanthionine synthetase component C-like proteins as molecular targets for preventing and treating diseases and disorders.
- Bassaganya-Riera, J., P. Lu, and R. Hontecillas
(10-116 VTIP) PCT/US11/35185. Notice of Allowance 13/100,795 and EU 11778258.1
-
Method of Preventing and Treating Inflammatory Diseases and Disorders with Abscisic Acid.
- Bassaganya-Riera, J., A.J. Guri, and R. Hontecillas
(10-134 VTIP) Provisional Patent Application No: 61/348,326, International application number: PCT/US11/38063. Issue fee paid
-
Novel LANCL2-based Therapeutics.
- Bassaganya-Riera, J., A. Carbo, J. Cooper, R. Gandour, and R. Hontecillas
Provisional Patent Applications No: 62/068,322 & 62/101,164.